STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYL99_04831Uncharacterized protein. (346 aa)    
Predicted Functional Partners:
AYL99_08713
Uncharacterized protein.
   
    0.774
AYL99_00384
Uncharacterized protein.
   
  0.684
AYL99_00749
Uncharacterized protein.
 
      0.652
AYL99_11068
Uncharacterized protein.
    
  0.639
AYL99_04602
DUF2235 domain-containing protein.
   
  0.633
AYL99_07122
Uncharacterized protein.
   
 
  0.621
AYL99_04027
Cell division control protein 42.
   
 
  0.621
AYL99_00960
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.611
AYL99_10819
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
    0.610
AYL99_09302
Uncharacterized protein.
   
    0.610
Your Current Organism:
Fonsecaea erecta
NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a
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