AYL99_03721 protein (Fonsecaea erecta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AYL99_03721

Uncharacterized protein. (545 aa)

Predicted Functional Partners:

AYL99_00344

0.925

AYL99_07667

0.857

AYL99_00932

0.805

AYL99_00891

0.778

AYL99_02561

0.776

AYL99_11390

0.773

AYL99_03719

0.771

AYL99_06391

0.769

AYL99_03510

0.769

AYL99_11189

0.767

Your Current Organism:

Fonsecaea erecta

NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AYL99_00344	AYL99_03721	A0A178ZXF9	A0A178ZNX2	Uncharacterized protein.	Uncharacterized protein.	0.925
AYL99_00891	AYL99_00932	A0A178ZYP3	A0A178ZYM1	Glutaminase A.	GMP synthase.	0.463
AYL99_00891	AYL99_02561	A0A178ZYP3	A0A178ZU85	Glutaminase A.	Argininosuccinate synthase.	0.509
AYL99_00891	AYL99_03510	A0A178ZYP3	A0A178ZNB9	Glutaminase A.	Amidophosphoribosyltransferase.	0.774
AYL99_00891	AYL99_03721	A0A178ZYP3	A0A178ZNX2	Glutaminase A.	Uncharacterized protein.	0.778
AYL99_00891	AYL99_06391	A0A178ZYP3	A0A178ZIT0	Glutaminase A.	NADPH:adrenodoxin oxidoreductase, mitochondrial.	0.827
AYL99_00891	AYL99_11189	A0A178ZYP3	A0A178Z5E5	Glutaminase A.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.566
AYL99_00932	AYL99_00891	A0A178ZYM1	A0A178ZYP3	GMP synthase.	Glutaminase A.	0.463
AYL99_00932	AYL99_03510	A0A178ZYM1	A0A178ZNB9	GMP synthase.	Amidophosphoribosyltransferase.	0.698
AYL99_00932	AYL99_03721	A0A178ZYM1	A0A178ZNX2	GMP synthase.	Uncharacterized protein.	0.805
AYL99_00932	AYL99_07667	A0A178ZYM1	A0A178ZFL9	GMP synthase.	Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.	0.944
AYL99_00932	AYL99_11189	A0A178ZYM1	A0A178Z5E5	GMP synthase.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.972
AYL99_00932	AYL99_11390	A0A178ZYM1	A0A178Z3D5	GMP synthase.	Asparagine synthase (Glutamine-hydrolyzing).	0.497
AYL99_02561	AYL99_00891	A0A178ZU85	A0A178ZYP3	Argininosuccinate synthase.	Glutaminase A.	0.509
AYL99_02561	AYL99_03510	A0A178ZU85	A0A178ZNB9	Argininosuccinate synthase.	Amidophosphoribosyltransferase.	0.889
AYL99_02561	AYL99_03721	A0A178ZU85	A0A178ZNX2	Argininosuccinate synthase.	Uncharacterized protein.	0.776
AYL99_02561	AYL99_06391	A0A178ZU85	A0A178ZIT0	Argininosuccinate synthase.	NADPH:adrenodoxin oxidoreductase, mitochondrial.	0.731
AYL99_02561	AYL99_11189	A0A178ZU85	A0A178Z5E5	Argininosuccinate synthase.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.549
AYL99_02561	AYL99_11390	A0A178ZU85	A0A178Z3D5	Argininosuccinate synthase.	Asparagine synthase (Glutamine-hydrolyzing).	0.885
AYL99_03510	AYL99_00891	A0A178ZNB9	A0A178ZYP3	Amidophosphoribosyltransferase.	Glutaminase A.	0.774