STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYL99_03894ULP_PROTEASE domain-containing protein. (1287 aa)    
Predicted Functional Partners:
AYL99_11646
Ubiquitin-like domain-containing protein.
    
 0.971
AYL99_11555
Ubiquitin-like domain-containing protein.
    
 0.971
AYL99_09165
ULP_PROTEASE domain-containing protein.
    
0.953
AYL99_05005
Csm1 domain-containing protein.
    
 
 0.932
AYL99_09160
Ipi1_N domain-containing protein.
    
 0.778
AYL99_09391
RanBD1 domain-containing protein.
    
 0.757
AYL99_11389
SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.725
AYL99_02026
Uncharacterized protein.
   
  0.713
AYL99_02027
Uncharacterized protein.
   
  0.713
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
    
  0.711
Your Current Organism:
Fonsecaea erecta
NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a
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