STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYL99_04195GRASP55_65 domain-containing protein. (366 aa)    
Predicted Functional Partners:
AYL99_02964
Serine/threonine-protein kinase.
   
 0.985
AYL99_06635
Uncharacterized protein.
   
 0.928
AYL99_07588
Protein transporter SEC24.
   
 0.915
AYL99_07654
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.901
AYL99_09812
Uncharacterized protein.
    
 0.894
AYL99_05432
Uncharacterized protein.
    
 0.894
AYL99_06175
Uncharacterized protein.
    
 0.881
AYL99_11719
Uncharacterized protein.
   
 0.844
AYL99_01775
Uncharacterized protein.
   
 0.844
AYL99_06307
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.836
Your Current Organism:
Fonsecaea erecta
NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a
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