STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYL99_03886Succinate-semialdehyde dehydrogenase. (453 aa)    
Predicted Functional Partners:
AYL99_08301
Tryptophan synthase.
    
 0.813
AYL99_03257
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 0.773
AYL99_10912
Citrate synthase; Belongs to the citrate synthase family.
  
 0.738
AYL99_05138
Citrate synthase; Belongs to the citrate synthase family.
  
 0.738
AYL99_01921
ATP-citrate synthase subunit 1.
  
 0.668
AYL99_01922
Uncharacterized protein.
  
 0.668
AYL99_09027
Fumarate hydratase, class II.
    
 0.656
AYL99_10023
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component.
   
 
 0.651
AYL99_10579
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 
 0.649
AYL99_10572
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
    
 0.647
Your Current Organism:
Fonsecaea erecta
NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.