STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYL99_01954Uncharacterized protein. (1067 aa)    
Predicted Functional Partners:
AYL99_06598
Transcription initiation protein SPT3.
    
 
 0.767
AYL99_07806
Uncharacterized protein.
    
 
 0.763
AYL99_00578
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.762
AYL99_10072
SGF29 C-terminal domain-containing protein.
    
 
 0.744
AYL99_01029
Uncharacterized protein.
   
 
 0.735
AYL99_08061
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 
 0.726
AYL99_04747
TFIID_20kDa domain-containing protein.
    
 
 0.725
AYL99_05091
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 
 0.698
AYL99_03968
TAF domain-containing protein.
    
 
 0.677
AYL99_00533
WD_REPEATS_REGION domain-containing protein.
    
 
 0.673
Your Current Organism:
Fonsecaea erecta
NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.