STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYL99_00414CNH domain-containing protein. (1204 aa)    
Predicted Functional Partners:
AYL99_03265
Pep3_Vps18 domain-containing protein.
   
 0.996
AYL99_01712
E3 ubiquitin-protein ligase PEP5.
   
 0.996
AYL99_06202
Uncharacterized protein.
   
 0.995
AYL99_02097
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
   
 0.995
AYL99_02749
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.994
AYL99_07012
CNH domain-containing protein.
    
 
 0.960
AYL99_03157
Vps8 domain-containing protein.
   
 
 0.942
AYL99_08867
Uncharacterized protein.
   
 0.935
AYL99_06456
Uncharacterized protein.
    
 
 0.914
AYL99_05641
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 
 0.909
Your Current Organism:
Fonsecaea erecta
NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a
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