AYL99_01667 protein (Fonsecaea erecta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AYL99_01667

Uncharacterized protein. (1374 aa)

Predicted Functional Partners:

AYL99_07326

0.714

AYL99_09753

0.641

AYL99_06103

0.605

AYL99_00993

0.589

AYL99_04621

0.583

AYL99_08561

0.575

AYL99_03069

0.559

AYL99_10247

0.553

AYL99_01911

0.553

AYL99_08649

0.542

Your Current Organism:

Fonsecaea erecta

NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AYL99_00993	AYL99_01667	A0A179A098	A0A179A3G7	26S proteasome regulatory subunit rpn11.	Uncharacterized protein.	0.589
AYL99_00993	AYL99_01911	A0A179A098	A0A178ZS79	26S proteasome regulatory subunit rpn11.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
AYL99_00993	AYL99_03069	A0A179A098	A0A178ZVV2	26S proteasome regulatory subunit rpn11.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.999
AYL99_00993	AYL99_06103	A0A179A098	A0A178ZH73	26S proteasome regulatory subunit rpn11.	Mitochondrial-processing peptidase subunit beta.	0.411
AYL99_00993	AYL99_08649	A0A179A098	A0A178ZEJ2	26S proteasome regulatory subunit rpn11.	26S proteasome regulatory subunit rpn-8.	0.999
AYL99_01667	AYL99_00993	A0A179A3G7	A0A179A098	Uncharacterized protein.	26S proteasome regulatory subunit rpn11.	0.589
AYL99_01667	AYL99_01911	A0A179A3G7	A0A178ZS79	Uncharacterized protein.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.553
AYL99_01667	AYL99_03069	A0A179A3G7	A0A178ZVV2	Uncharacterized protein.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.559
AYL99_01667	AYL99_04621	A0A179A3G7	A0A178ZRF1	Uncharacterized protein.	Syntaxin 1B/2/3/4.	0.583
AYL99_01667	AYL99_06103	A0A179A3G7	A0A178ZH73	Uncharacterized protein.	Mitochondrial-processing peptidase subunit beta.	0.605
AYL99_01667	AYL99_07326	A0A179A3G7	A0A178ZFH5	Uncharacterized protein.	Uncharacterized protein.	0.714
AYL99_01667	AYL99_08561	A0A179A3G7	A0A178ZF61	Uncharacterized protein.	Uncharacterized protein.	0.575
AYL99_01667	AYL99_08649	A0A179A3G7	A0A178ZEJ2	Uncharacterized protein.	26S proteasome regulatory subunit rpn-8.	0.542
AYL99_01667	AYL99_09753	A0A179A3G7	A0A178Z7C6	Uncharacterized protein.	Uncharacterized protein.	0.641
AYL99_01667	AYL99_10247	A0A179A3G7	A0A178Z680	Uncharacterized protein.	AMP-binding domain-containing protein.	0.553
AYL99_01911	AYL99_00993	A0A178ZS79	A0A179A098	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S proteasome regulatory subunit rpn11.	0.999
AYL99_01911	AYL99_01667	A0A178ZS79	A0A179A3G7	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	Uncharacterized protein.	0.553
AYL99_01911	AYL99_03069	A0A178ZS79	A0A178ZVV2	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.999
AYL99_01911	AYL99_08649	A0A178ZS79	A0A178ZEJ2	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S proteasome regulatory subunit rpn-8.	0.999
AYL99_03069	AYL99_00993	A0A178ZVV2	A0A179A098	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit rpn11.	0.999