Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGX02942.1 | AGX03210.1 | N288_04930 | N288_06385 | Response regulator in two-component regulatory system with DcuS; phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.530 |
| AGX03210.1 | AGX02942.1 | N288_06385 | N288_04930 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Response regulator in two-component regulatory system with DcuS; phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.530 |
| AGX03210.1 | AGX03211.1 | N288_06385 | N288_06390 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.981 |
| AGX03210.1 | AGX03212.1 | N288_06385 | N288_06395 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.612 |
| AGX03210.1 | AGX03213.1 | N288_06385 | N288_06400 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Sodium ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.635 |
| AGX03210.1 | AGX04884.1 | N288_06385 | N288_14920 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.572 |
| AGX03210.1 | AGX06354.1 | N288_06385 | N288_22575 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.470 |
| AGX03211.1 | AGX03210.1 | N288_06390 | N288_06385 | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.981 |
| AGX03211.1 | AGX03212.1 | N288_06390 | N288_06395 | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.658 |
| AGX03211.1 | AGX03213.1 | N288_06390 | N288_06400 | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Sodium ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.623 |
| AGX03212.1 | AGX03210.1 | N288_06395 | N288_06385 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.612 |
| AGX03212.1 | AGX03211.1 | N288_06395 | N288_06390 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.658 |
| AGX03212.1 | AGX03213.1 | N288_06395 | N288_06400 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Sodium ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.997 |
| AGX03213.1 | AGX03210.1 | N288_06400 | N288_06385 | Sodium ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.635 |
| AGX03213.1 | AGX03211.1 | N288_06400 | N288_06390 | Sodium ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.623 |
| AGX03213.1 | AGX03212.1 | N288_06400 | N288_06395 | Sodium ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.997 |
| AGX04884.1 | AGX03210.1 | N288_14920 | N288_06385 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.572 |
| AGX06354.1 | AGX03210.1 | N288_22575 | N288_06385 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.470 |