STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGX04069.1LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (331 aa)    
Predicted Functional Partners:
AGX03098.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 
 0.760
AGX04070.1
Altronate oxidoreductase; Catalyzes the formation of D-tagaturonate from D-altronate; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.686
AGX04071.1
Altronate hydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.681
uxaC
Glucuronate isomerase; Catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.674
AGX04073.1
2-dehydro-3-deoxygluconokinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.517
AGX05802.1
Pyruvate kinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 
 0.508
AGX03630.1
Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.501
AGX04072.1
Ketohydroxyglutarate aldolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.490
kduI
5-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
  
  
 0.481
AGX05036.1
PTS fructose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.455
Your Current Organism:
Bacillus infantis
NCBI taxonomy Id: 1367477
Other names: B. infantis NRRL B-14911, Bacillus infantis NRRL B-14911
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