Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGX02597.1 | AGX02599.1 | N288_03170 | N288_03180 | Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the amidase family. | Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.932 |
| AGX02597.1 | AGX04162.1 | N288_03170 | N288_11255 | Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the amidase family. | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.904 |
| AGX02599.1 | AGX02597.1 | N288_03180 | N288_03170 | Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the amidase family. | 0.932 |
| AGX02599.1 | AGX04162.1 | N288_03180 | N288_11255 | Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.904 |
| AGX04162.1 | AGX02597.1 | N288_11255 | N288_03170 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the amidase family. | 0.904 |
| AGX04162.1 | AGX02599.1 | N288_11255 | N288_03180 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.904 |
| AGX04162.1 | AGX04164.1 | N288_11255 | N288_11265 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA oxygenase subunit PaaH; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.981 |
| AGX04162.1 | AGX04165.1 | N288_11255 | N288_11270 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA oxygenase subunit PaaI; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.992 |
| AGX04162.1 | AGX04166.1 | N288_11255 | N288_11275 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA oxygenase subunit PaaJ; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.990 |
| AGX04162.1 | AGX04167.1 | N288_11255 | N288_11280 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Ethyl tert-butyl ether degradation protein EthD; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.709 |
| AGX04162.1 | AGX04168.1 | N288_11255 | N288_11285 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.661 |
| AGX04162.1 | AGX04171.1 | N288_11255 | N288_11300 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | PaaX family transcrtiptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.746 |
| AGX04162.1 | AGX04388.1 | N288_11255 | N288_12410 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | AMP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.561 |
| AGX04162.1 | paaA | N288_11255 | N288_11260 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA oxygenase subunit PaaA; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.994 |
| AGX04164.1 | AGX04162.1 | N288_11265 | N288_11255 | phenylacetate-CoA oxygenase subunit PaaH; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.981 |
| AGX04164.1 | AGX04165.1 | N288_11265 | N288_11270 | phenylacetate-CoA oxygenase subunit PaaH; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | phenylacetate-CoA oxygenase subunit PaaI; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.999 |
| AGX04164.1 | AGX04166.1 | N288_11265 | N288_11275 | phenylacetate-CoA oxygenase subunit PaaH; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | phenylacetate-CoA oxygenase subunit PaaJ; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.996 |
| AGX04164.1 | AGX04167.1 | N288_11265 | N288_11280 | phenylacetate-CoA oxygenase subunit PaaH; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Ethyl tert-butyl ether degradation protein EthD; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.919 |
| AGX04164.1 | AGX04168.1 | N288_11265 | N288_11285 | phenylacetate-CoA oxygenase subunit PaaH; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.973 |
| AGX04164.1 | AGX04171.1 | N288_11265 | N288_11300 | phenylacetate-CoA oxygenase subunit PaaH; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | PaaX family transcrtiptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.883 |
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