Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGX03150.1 | AGX04556.1 | N288_06080 | N288_13270 | L-cystine transporter tcyP; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Ferredoxin-nitrite reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.535 |
| AGX03150.1 | cysC | N288_06080 | N288_11315 | L-cystine transporter tcyP; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.556 |
| AGX03150.1 | cysC-2 | N288_06080 | N288_13275 | L-cystine transporter tcyP; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.556 |
| AGX03150.1 | cysH | N288_06080 | N288_13290 | L-cystine transporter tcyP; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.403 |
| AGX04175.1 | cysC | N288_11320 | N288_11315 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.883 |
| AGX04175.1 | cysC-2 | N288_11320 | N288_13275 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.563 |
| AGX04175.1 | sat | N288_11320 | N288_11310 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.794 |
| AGX04554.1 | AGX04556.1 | N288_13260 | N288_13270 | uroporphyrin-III C-methyltransferase; Catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Ferredoxin-nitrite reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.989 |
| AGX04554.1 | cysC | N288_13260 | N288_11315 | uroporphyrin-III C-methyltransferase; Catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.696 |
| AGX04554.1 | cysC-2 | N288_13260 | N288_13275 | uroporphyrin-III C-methyltransferase; Catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.923 |
| AGX04554.1 | cysH | N288_13260 | N288_13290 | uroporphyrin-III C-methyltransferase; Catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.980 |
| AGX04554.1 | sat | N288_13260 | N288_11310 | uroporphyrin-III C-methyltransferase; Catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.695 |
| AGX04554.1 | sat-2 | N288_13260 | N288_13280 | uroporphyrin-III C-methyltransferase; Catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.916 |
| AGX04556.1 | AGX03150.1 | N288_13270 | N288_06080 | Ferredoxin-nitrite reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | L-cystine transporter tcyP; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.535 |
| AGX04556.1 | AGX04554.1 | N288_13270 | N288_13260 | Ferredoxin-nitrite reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | uroporphyrin-III C-methyltransferase; Catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.989 |
| AGX04556.1 | cysC | N288_13270 | N288_11315 | Ferredoxin-nitrite reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.819 |
| AGX04556.1 | cysC-2 | N288_13270 | N288_13275 | Ferredoxin-nitrite reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.954 |
| AGX04556.1 | cysH | N288_13270 | N288_13290 | Ferredoxin-nitrite reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.997 |
| AGX04556.1 | sat | N288_13270 | N288_11310 | Ferredoxin-nitrite reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.782 |
| AGX04556.1 | sat-2 | N288_13270 | N288_13280 | Ferredoxin-nitrite reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.940 |
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