STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGX04715.1D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (371 aa)    
Predicted Functional Partners:
AGX02257.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.675
AGX02390.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.584
AGX05819.1
Cytosine permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.542
AGX04714.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.534
AGX06870.1
NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.506
AGX02655.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.444
AGX04748.1
NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.438
AGX06845.1
Helicase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.426
Your Current Organism:
Bacillus infantis
NCBI taxonomy Id: 1367477
Other names: B. infantis NRRL B-14911, Bacillus infantis NRRL B-14911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.