STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGX04982.1Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (337 aa)    
Predicted Functional Partners:
AGX03455.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.989
AGX04983.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.987
AGX04980.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.974
AGX03454.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.970
AGX04984.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.964
AGX03521.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.958
AGX03096.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.946
AGX04586.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.946
AGX03449.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.927
AGX03453.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.927
Your Current Organism:
Bacillus infantis
NCBI taxonomy Id: 1367477
Other names: B. infantis NRRL B-14911, Bacillus infantis NRRL B-14911
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