Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGX02125.1 | AGX02126.1 | N288_00460 | N288_00465 | Para-aminobenzoate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Anthranilate synthase subunit II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.999 |
| AGX02125.1 | AGX05024.1 | N288_00460 | N288_15625 | Para-aminobenzoate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Anthranilate synthase subunit II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.999 |
| AGX02125.1 | aroE | N288_00460 | N288_18585 | Para-aminobenzoate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.553 |
| AGX02125.1 | menF | N288_00460 | N288_20420 | Para-aminobenzoate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | 0.427 |
| AGX02125.1 | trpA | N288_00460 | N288_15600 | Para-aminobenzoate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.943 |
| AGX02125.1 | trpB | N288_00460 | N288_15605 | Para-aminobenzoate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.950 |
| AGX02125.1 | trpC | N288_00460 | N288_15615 | Para-aminobenzoate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Indole-3-glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the TrpC family. | 0.992 |
| AGX02125.1 | trpD | N288_00460 | N288_15620 | Para-aminobenzoate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.991 |
| AGX02125.1 | trpE | N288_00460 | N288_15630 | Para-aminobenzoate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Anthranilate synthase subunit I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrat [...] | 0.824 |
| AGX02125.1 | trpF | N288_00460 | N288_15610 | Para-aminobenzoate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | N-(5'-phosphoribosyl)anthranilate isomerase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the TrpF family. | 0.955 |
| AGX02126.1 | AGX02125.1 | N288_00465 | N288_00460 | Anthranilate synthase subunit II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Para-aminobenzoate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.999 |
| AGX02126.1 | AGX05024.1 | N288_00465 | N288_15625 | Anthranilate synthase subunit II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Anthranilate synthase subunit II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.810 |
| AGX02126.1 | aroE | N288_00465 | N288_18585 | Anthranilate synthase subunit II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.624 |
| AGX02126.1 | menF | N288_00465 | N288_20420 | Anthranilate synthase subunit II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | 0.660 |
| AGX02126.1 | trpA | N288_00465 | N288_15600 | Anthranilate synthase subunit II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.945 |
| AGX02126.1 | trpB | N288_00465 | N288_15605 | Anthranilate synthase subunit II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.941 |
| AGX02126.1 | trpC | N288_00465 | N288_15615 | Anthranilate synthase subunit II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Indole-3-glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the TrpC family. | 0.995 |
| AGX02126.1 | trpD | N288_00465 | N288_15620 | Anthranilate synthase subunit II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.994 |
| AGX02126.1 | trpE | N288_00465 | N288_15630 | Anthranilate synthase subunit II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Anthranilate synthase subunit I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrat [...] | 0.999 |
| AGX02126.1 | trpF | N288_00465 | N288_15610 | Anthranilate synthase subunit II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | N-(5'-phosphoribosyl)anthranilate isomerase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the TrpF family. | 0.976 |
page 1 of 6