STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGX05399.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (111 aa)    
Predicted Functional Partners:
AGX02026.1
UV-damage repair protein uvrX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA polymerase type-Y family.
 
  
 0.921
AGX03351.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    0.784
AGX03987.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.718
AGX02634.1
Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.639
AGX05398.1
Malate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.612
AGX05342.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.590
AGX05872.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.571
AGX05773.1
Sigma-w pathway protein ysdB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.564
AGX05285.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.563
AGX03556.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.542
Your Current Organism:
Bacillus infantis
NCBI taxonomy Id: 1367477
Other names: B. infantis NRRL B-14911, Bacillus infantis NRRL B-14911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.