STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGX05696.1Prepilin peptidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (247 aa)    
Predicted Functional Partners:
AGX05697.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.947
AGX05695.1
Tfp pilus assembly protein, ATPase PilM; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.945
AGX05698.1
Type II secretion system protein F; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.944
AGX05700.1
Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.941
AGX05699.1
Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.933
AGX05692.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.918
AGX05492.1
Competence protein ComG; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.892
AGX05493.1
Competence protein ComG; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.885
AGX05693.1
Type IV pilus assembly protein PilO; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.853
AGX05694.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.853
Your Current Organism:
Bacillus infantis
NCBI taxonomy Id: 1367477
Other names: B. infantis NRRL B-14911, Bacillus infantis NRRL B-14911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.