STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGX06088.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)    
Predicted Functional Partners:
AGX06089.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.999
AGX02965.1
3-hydroxybutyryl-CoA dehydrogenase; Converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.969
AGX06622.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.950
AGX02701.1
isovaleryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.949
AGX03491.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.947
AGX04223.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.943
AGX05415.1
methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.938
AGX06087.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.930
AGX05393.1
hydroxymethylglutaryl-CoA lyase; Catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.929
AGX06625.1
acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 
0.914
Your Current Organism:
Bacillus infantis
NCBI taxonomy Id: 1367477
Other names: B. infantis NRRL B-14911, Bacillus infantis NRRL B-14911
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