STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGX06400.1Histidine kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (294 aa)    
Predicted Functional Partners:
AGX02298.1
Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.910
AGX02972.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.894
AGX02293.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.893
AGX03873.1
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
 
 0.818
AGX03220.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.814
AGX02292.1
RsbT antagonist protein rsbS; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    0.780
AGX03552.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.749
AGX03388.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.745
AGX02705.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.728
AGX02294.1
Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.685
Your Current Organism:
Bacillus infantis
NCBI taxonomy Id: 1367477
Other names: B. infantis NRRL B-14911, Bacillus infantis NRRL B-14911
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