STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN06289.1Hypothetical protein. (323 aa)    
Predicted Functional Partners:
SFN12977.1
Protein of unknown function.
  
     0.671
SFN23623.1
Regulator RcnB of Ni and Co efflux.
  
     0.628
SFN61767.1
Fusaric acid resistance protein family protein.
  
     0.605
SFN17444.1
AmpE protein.
  
     0.548
SFM87987.1
Protein of unknown function.
  
     0.531
SFN31540.1
Hypothetical protein.
  
     0.498
SFN55371.1
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
     0.466
SFN22970.1
Peptide/bleomycin uptake transporter.
  
     0.441
SFN36488.1
Protein of unknown function.
  
     0.432
SFM86199.1
Protein of unknown function.
  
     0.424
Your Current Organism:
Izhakiella capsodis
NCBI taxonomy Id: 1367852
Other names: DSM 29293, Enterobacteriaceae bacterium N6PO6, Enterobacteriaceae bacterium N8PI1, Enterobacteriaceae bacterium N8PO1, I. capsodis, Izhakiella capsodis Aizenberg-Gershtein et al. 2016, LMG 28430, LMG:28430, strain N6PO6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.