Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKK07942.1Hypothetical protein. (414 aa)    
Predicted Functional Partners:
AKK08184.1
FtsX-like permease family.
  
 
 0.755
AKK07939.1
tRNA threonylcarbamoyl adenosine modification protein.
  
    0.710
gcp
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
    0.701
AKK07938.1
Hypothetical protein.
       0.689
AKK07940.1
Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
       0.689
AKK07884.1
ABC-type antimicrobial peptide transport system, permease component.
  
 
 0.551
AKK09593.1
MacB-like periplasmic core domain/FtsX-like permease family.
  
 
 0.551
AKK07937.1
Putative permease.
       0.541
AKK07943.1
Hypothetical protein.
       0.529
AKK09575.1
Hypothetical protein.
  
     0.511
Your Current Organism:
Corynebacterium testudinoris
NCBI taxonomy Id: 136857
Other names: C. testudinoris, CCUG 41823, CIP 106763, Corynebacterium testudinoris Collns et al. 2001, DSM 44614, JCM 12108, strain M935/96/4
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