Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKK08105.1Putative DUF3107 family protein. (91 aa)    
Predicted Functional Partners:
AKK08107.1
Hypothetical protein.
 
     0.871
AKK08106.1
Putative DUF3152 family protein.
  
    0.837
AKK08110.1
K+ transport system, NAD-binding component.
 
     0.821
AKK08108.1
DNA/RNA helicase, superfamily I; Belongs to the helicase family. UvrD subfamily.
       0.776
AKK08109.1
DNA/RNA helicase, superfamily I; Belongs to the helicase family. UvrD subfamily.
       0.776
AKK08103.1
Hypothetical protein.
 
     0.737
AKK08111.1
NUDIX family protein.
       0.693
uvrD2
ATP-dependent DNA helicase, Rep family.
       0.693
deaD2
DNA/RNA helicase, superfamily II; Belongs to the DEAD box helicase family.
       0.677
AKK09151.1
Cell division initiation protein.
  
     0.576
Your Current Organism:
Corynebacterium testudinoris
NCBI taxonomy Id: 136857
Other names: C. testudinoris, CCUG 41823, CIP 106763, Corynebacterium testudinoris Collns et al. 2001, DSM 44614, JCM 12108, strain M935/96/4
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