Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKK08320.1 | AKK08321.1 | CTEST_04365 | CTEST_04370 | Aminodeoxychorismate synthase, component I. | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | 0.895 |
AKK08320.1 | coaA | CTEST_04365 | CTEST_04355 | Aminodeoxychorismate synthase, component I. | Pantothenate kinase. | 0.698 |
AKK08320.1 | glyA | CTEST_04365 | CTEST_04360 | Aminodeoxychorismate synthase, component I. | Glycine/serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.870 |
AKK08321.1 | AKK08320.1 | CTEST_04370 | CTEST_04365 | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | Aminodeoxychorismate synthase, component I. | 0.895 |
AKK08321.1 | AKK09236.1 | CTEST_04370 | CTEST_09035 | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | Putative membrane protein. | 0.421 |
AKK08321.1 | coaA | CTEST_04370 | CTEST_04355 | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | Pantothenate kinase. | 0.679 |
AKK08321.1 | glyA | CTEST_04370 | CTEST_04360 | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | Glycine/serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.844 |
AKK09236.1 | AKK08321.1 | CTEST_09035 | CTEST_04370 | Putative membrane protein. | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | 0.421 |
AKK09236.1 | coaA | CTEST_09035 | CTEST_04355 | Putative membrane protein. | Pantothenate kinase. | 0.462 |
AKK09739.1 | coaA | CTEST_11660 | CTEST_04355 | Pantothenate synthetase. | Pantothenate kinase. | 0.919 |
AKK09739.1 | coaBC | CTEST_11660 | CTEST_07190 | Pantothenate synthetase. | Phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.855 |
AKK09739.1 | panC | CTEST_11660 | CTEST_00580 | Pantothenate synthetase. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.926 |
coaA | AKK08320.1 | CTEST_04355 | CTEST_04365 | Pantothenate kinase. | Aminodeoxychorismate synthase, component I. | 0.698 |
coaA | AKK08321.1 | CTEST_04355 | CTEST_04370 | Pantothenate kinase. | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | 0.679 |
coaA | AKK09236.1 | CTEST_04355 | CTEST_09035 | Pantothenate kinase. | Putative membrane protein. | 0.462 |
coaA | AKK09739.1 | CTEST_04355 | CTEST_11660 | Pantothenate kinase. | Pantothenate synthetase. | 0.919 |
coaA | coaBC | CTEST_04355 | CTEST_07190 | Pantothenate kinase. | Phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.945 |
coaA | coaD | CTEST_04355 | CTEST_05920 | Pantothenate kinase. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.957 |
coaA | coaE | CTEST_04355 | CTEST_06015 | Pantothenate kinase. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.527 |
coaA | glyA | CTEST_04355 | CTEST_04360 | Pantothenate kinase. | Glycine/serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.673 |
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