Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKK09049.1Putative RND superfamily drug exporter. (640 aa)    
Predicted Functional Partners:
AKK09304.1
Acyl carrier protein.
    
 
 0.771
AKK09048.1
Hypothetical protein.
       0.747
pks13
Polyketide synthase family protein.
  
 
 0.612
rimP
Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
       0.591
nusA
NusA antitermination factor; Participates in both transcription termination and antitermination.
       0.589
AKK08020.1
Putative DUF3151 family protein.
 
      0.483
AKK08069.1
Lycopene cyclase domain.
     
 0.450
AKK08067.1
Phytoene desaturase.
     
 0.402
Your Current Organism:
Corynebacterium testudinoris
NCBI taxonomy Id: 136857
Other names: C. testudinoris, CCUG 41823, CIP 106763, Corynebacterium testudinoris Collns et al. 2001, DSM 44614, JCM 12108, strain M935/96/4
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