Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKK09230.1Hypothetical protein. (134 aa)    
Predicted Functional Partners:
pknL
Serine/threonine protein kinase.
     
 0.759
AKK09265.1
Hypothetical protein.
  
     0.602
AKK08962.1
Putative DUF3039 family protein.
  
     0.601
AKK09227.1
Acetyltransferase (GNAT) family protein.
  
     0.519
AKK07760.1
Hypothetical protein.
  
     0.498
AKK08948.1
Putative DUF3000 family protein.
  
     0.470
AKK08092.1
Hypothetical protein.
  
     0.461
rbpA
Putative DUF4109 family protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.461
AKK09652.1
Hypothetical protein.
  
     0.454
AKK09208.1
YGGT family protein.
  
     0.438
Your Current Organism:
Corynebacterium testudinoris
NCBI taxonomy Id: 136857
Other names: C. testudinoris, CCUG 41823, CIP 106763, Corynebacterium testudinoris Collns et al. 2001, DSM 44614, JCM 12108, strain M935/96/4
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.