Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKK09408.1 | AKK09409.1 | CTEST_09915 | CTEST_09920 | Hypothetical protein. | Pirin-related protein; Belongs to the pirin family. | 0.642 |
AKK09408.1 | AKK09410.1 | CTEST_09915 | CTEST_09925 | Hypothetical protein. | Putative acetyltransferase. | 0.718 |
AKK09408.1 | AKK09411.1 | CTEST_09915 | CTEST_09930 | Hypothetical protein. | Alkylhydroperoxidase AhpD family core domain; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | 0.642 |
AKK09408.1 | AKK09412.1 | CTEST_09915 | CTEST_09935 | Hypothetical protein. | Putative DUF4233 family protein. | 0.786 |
AKK09408.1 | folC | CTEST_09915 | CTEST_09940 | Hypothetical protein. | Folylpolyglutamate synthase/dihydrofolate synthase. | 0.786 |
AKK09408.1 | ndk | CTEST_09915 | CTEST_09910 | Hypothetical protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.788 |
AKK09408.1 | valS | CTEST_09915 | CTEST_09945 | Hypothetical protein. | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.761 |
AKK09409.1 | AKK09408.1 | CTEST_09920 | CTEST_09915 | Pirin-related protein; Belongs to the pirin family. | Hypothetical protein. | 0.642 |
AKK09409.1 | AKK09410.1 | CTEST_09920 | CTEST_09925 | Pirin-related protein; Belongs to the pirin family. | Putative acetyltransferase. | 0.883 |
AKK09409.1 | AKK09411.1 | CTEST_09920 | CTEST_09930 | Pirin-related protein; Belongs to the pirin family. | Alkylhydroperoxidase AhpD family core domain; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | 0.870 |
AKK09409.1 | ndk | CTEST_09920 | CTEST_09910 | Pirin-related protein; Belongs to the pirin family. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.547 |
AKK09410.1 | AKK09408.1 | CTEST_09925 | CTEST_09915 | Putative acetyltransferase. | Hypothetical protein. | 0.718 |
AKK09410.1 | AKK09409.1 | CTEST_09925 | CTEST_09920 | Putative acetyltransferase. | Pirin-related protein; Belongs to the pirin family. | 0.883 |
AKK09410.1 | AKK09411.1 | CTEST_09925 | CTEST_09930 | Putative acetyltransferase. | Alkylhydroperoxidase AhpD family core domain; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | 0.832 |
AKK09410.1 | AKK09412.1 | CTEST_09925 | CTEST_09935 | Putative acetyltransferase. | Putative DUF4233 family protein. | 0.804 |
AKK09410.1 | folC | CTEST_09925 | CTEST_09940 | Putative acetyltransferase. | Folylpolyglutamate synthase/dihydrofolate synthase. | 0.804 |
AKK09410.1 | ndk | CTEST_09925 | CTEST_09910 | Putative acetyltransferase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.702 |
AKK09410.1 | valS | CTEST_09925 | CTEST_09945 | Putative acetyltransferase. | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.717 |
AKK09411.1 | AKK09408.1 | CTEST_09930 | CTEST_09915 | Alkylhydroperoxidase AhpD family core domain; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | Hypothetical protein. | 0.642 |
AKK09411.1 | AKK09409.1 | CTEST_09930 | CTEST_09920 | Alkylhydroperoxidase AhpD family core domain; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | Pirin-related protein; Belongs to the pirin family. | 0.870 |
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