STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKK09974.1Enoyl-CoA hydratase. (256 aa)    
Predicted Functional Partners:
AKK09977.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.990
AKK09973.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
 
 
 0.985
AKK09970.1
phenylacetate-CoA oxygenase, PaaH subunit.
  
 
 0.982
AKK09971.1
phenylacetate-CoA oxygenase, PaaI subunit.
  
 
 0.981
paaJ
phenylacetate-CoA oxygenase, PaaJ subunit.
  
 
 0.981
paaA
phenylacetate-CoA oxygenase, PaaG subunit.
  
 
 0.978
AKK08253.1
enoyl-CoA hydratase/carnithine racemase.
 
  
 0.974
pcaF
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.946
AKK09980.1
Phenylacetic acid degradation protein paaN.
  
 0.939
AKK08869.1
enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 
0.928
Your Current Organism:
Corynebacterium testudinoris
NCBI taxonomy Id: 136857
Other names: C. testudinoris, CCUG 41823, CIP 106763, Corynebacterium testudinoris Collns et al. 2001, DSM 44614, JCM 12108, strain M935/96/4
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