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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BV96_01017Hypothetical protein; Membrane-flanked domain DUF304. (128 aa)    
Predicted Functional Partners:
BV96_00933
Hypothetical protein.
  
    0.635
BV96_04470
Hypothetical protein.
  
     0.619
BV96_01421
Putative succinyltransferase.
  
     0.617
BV96_01018
Hypothetical protein.
       0.608
BV96_00219
Hypothetical protein.
  
    0.600
BV96_00426
Hemerythrin HHE cation binding domain protein.
  
    0.600
BV96_00448
Hypothetical protein.
  
    0.600
BV96_00386
Cobaltochelatase.
  
    0.573
BV96_01646
Serine protease.
   
    0.563
BV96_02709
ATPase.
  
     0.561
Your Current Organism:
Sphingomonas paucimobilis
NCBI taxonomy Id: 13689
Other names: ATCC 10829 [[Flavobacterium devorans]], ATCC 29837, Bacillus devorans, CCUG 31192, CCUG 6518, CIP 100752, Chromobacterium devorans, DSM 30198 [[Flavobacterium devorans]], Flavobacterium devorans, GIFU 2395, GIFU:2395, IFO 13935, JCM 7516, LMG 4017 [[Flavobacterium devorans]], LMG:4017 [[Flavobacterium devorans]], NBRC 13935, NCAIM B.01654, NCPPB 3838, NCTC 11030, NRRL B-54 [[Flavobacterium devorans]], Pseudomonas paucimobilis, S. paucimobilis
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