Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BV96_02305Rieske (2Fe-2S) domain protein. (364 aa)    
Predicted Functional Partners:
BV96_02304
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.539
phnA2a
Ring hydroxylating dioxygenase beta subunit.
  
   0.531
BV96_02307
Putative iron-sulfur protein.
 
    
0.521
ahdA2c
Putative small subunit of oxygenase.
  
   0.521
xylY
Putative toluene/benzoate dioxygenase small subunit.
  
   0.517
bphA2d
Aromatic oxygenase small subunit.
  
   0.514
BV96_02306
Dihydrodipicolinate synthetase; Belongs to the DapA family.
       0.483
BV96_00290
Ethyl tert-butyl ether degradation EthD.
   
   0.443
ahdA2e
Small subunit of oxygenase.
   
   0.443
BV96_04686
Hypothetical protein.
  
     0.401
Your Current Organism:
Sphingomonas paucimobilis
NCBI taxonomy Id: 13689
Other names: ATCC 10829 [[Flavobacterium devorans]], ATCC 29837, Bacillus devorans, CCUG 31192, CCUG 6518, CIP 100752, Chromobacterium devorans, DSM 30198 [[Flavobacterium devorans]], Flavobacterium devorans, GIFU 2395, GIFU:2395, IFO 13935, JCM 7516, LMG 4017 [[Flavobacterium devorans]], LMG:4017 [[Flavobacterium devorans]], NBRC 13935, NCAIM B.01654, NCPPB 3838, NCTC 11030, NRRL B-54 [[Flavobacterium devorans]], Pseudomonas paucimobilis, S. paucimobilis
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