Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BV96_03227Putative helicase. (1723 aa)    
Predicted Functional Partners:
cobB_2
NAD-dependent protein deacylase; Belongs to the sirtuin family. Class III subfamily.
   
    0.762
BV96_01745
Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
   
    0.703
BV96_01622
GntR family transcriptional regulator.
   
    0.620
BV96_01388
Putative transcriptional regulator, CopG/Arc/MetJ family.
   
    0.619
BV96_01188
Glyoxalase.
   
    0.618
BV96_03228
Hypothetical protein.
       0.504
BV96_03229
Hypothetical protein.
       0.504
BV96_02588
Molybdopterin-guanine dinucleotide biosynthesis protein MobA.
 
     0.478
BV96_03267
Hypothetical protein.
 
   
 0.449
BV96_04491
Hypothetical protein.
   
    0.433
Your Current Organism:
Sphingomonas paucimobilis
NCBI taxonomy Id: 13689
Other names: ATCC 10829 [[Flavobacterium devorans]], ATCC 29837, Bacillus devorans, CCUG 31192, CCUG 6518, CIP 100752, Chromobacterium devorans, DSM 30198 [[Flavobacterium devorans]], Flavobacterium devorans, GIFU 2395, GIFU:2395, IFO 13935, JCM 7516, LMG 4017 [[Flavobacterium devorans]], LMG:4017 [[Flavobacterium devorans]], NBRC 13935, NCAIM B.01654, NCPPB 3838, NCTC 11030, NRRL B-54 [[Flavobacterium devorans]], Pseudomonas paucimobilis, S. paucimobilis
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