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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BV96_03355Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family. (290 aa)    
Predicted Functional Partners:
BV96_03354
Hypothetical protein.
  
    0.774
BV96_02921
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.761
BV96_02844
Transcriptional regulator precursor; Belongs to the LysR transcriptional regulatory family.
  
     0.747
BV96_00269
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.745
BV96_03033
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.731
BV96_03015
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.716
BV96_03356
Isovaleryl-CoA dehydrogenase.
       0.688
BV96_03357
Acetyl-CoA carboxylase subunit beta.
       0.676
BV96_00644
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.646
BV96_00605
Putative LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.644
Your Current Organism:
Sphingomonas paucimobilis
NCBI taxonomy Id: 13689
Other names: ATCC 10829 [[Flavobacterium devorans]], ATCC 29837, Bacillus devorans, CCUG 31192, CCUG 6518, CIP 100752, Chromobacterium devorans, DSM 30198 [[Flavobacterium devorans]], Flavobacterium devorans, GIFU 2395, GIFU:2395, IFO 13935, JCM 7516, LMG 4017 [[Flavobacterium devorans]], LMG:4017 [[Flavobacterium devorans]], NBRC 13935, NCAIM B.01654, NCPPB 3838, NCTC 11030, NRRL B-54 [[Flavobacterium devorans]], Pseudomonas paucimobilis, S. paucimobilis
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