Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BV96_03643HIT family hydrolase. (146 aa)    
Predicted Functional Partners:
BV96_02692
Glutamine synthetase.
   
   0.782
BV96_03644
3-oxoacid CoA-transferase, B subunit.
   
   0.778
BV96_03645
Succinyl-CoA:3-ketoacid-CoA transferase.
       0.768
BV96_03642
Glycosyl transferase.
  
    0.618
BV96_00697
Flagellar motor switch protein FliM.
    
   0.611
fliG
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
    
   0.611
BV96_00727
Flagellar hook protein; Belongs to the flagella basal body rod proteins family.
    
   0.611
BV96_00203
Putative pterin-4-alpha-carbinolamine dehydratase.
   
   0.607
BV96_01099
Glutamate synthase, small subunit.
   
   0.596
BV96_01544
Lysyl-tRNA synthetase.
   
 0.542
Your Current Organism:
Sphingomonas paucimobilis
NCBI taxonomy Id: 13689
Other names: ATCC 10829 [[Flavobacterium devorans]], ATCC 29837, Bacillus devorans, CCUG 31192, CCUG 6518, CIP 100752, Chromobacterium devorans, DSM 30198 [[Flavobacterium devorans]], Flavobacterium devorans, GIFU 2395, GIFU:2395, IFO 13935, JCM 7516, LMG 4017 [[Flavobacterium devorans]], LMG:4017 [[Flavobacterium devorans]], NBRC 13935, NCAIM B.01654, NCPPB 3838, NCTC 11030, NRRL B-54 [[Flavobacterium devorans]], Pseudomonas paucimobilis, S. paucimobilis
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