Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BV96_04415AAA+ family ATPase precursor; Belongs to the AAA ATPase family. (356 aa)    
Predicted Functional Partners:
BV96_04414
Hypothetical protein.
 
    0.903
lolD
ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
     0.643
BV96_01376
ABC transporter.
  
     0.607
ftsE
Cell division protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
  
     0.560
BV96_03406
ABC-type antimicrobial peptide transport system, ATPase component precursor.
  
     0.560
BV96_04413
Hypothetical protein.
       0.556
BV96_04416
Hypothetical protein.
       0.511
BV96_02826
ABC transporter ATP-binding protein.
  
     0.489
BV96_02163
ABC transporter family protein.
  
     0.478
dnaK
Heat shock protein 70; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
     0.471
Your Current Organism:
Sphingomonas paucimobilis
NCBI taxonomy Id: 13689
Other names: ATCC 10829 [[Flavobacterium devorans]], ATCC 29837, Bacillus devorans, CCUG 31192, CCUG 6518, CIP 100752, Chromobacterium devorans, DSM 30198 [[Flavobacterium devorans]], Flavobacterium devorans, GIFU 2395, GIFU:2395, IFO 13935, JCM 7516, LMG 4017 [[Flavobacterium devorans]], LMG:4017 [[Flavobacterium devorans]], NBRC 13935, NCAIM B.01654, NCPPB 3838, NCTC 11030, NRRL B-54 [[Flavobacterium devorans]], Pseudomonas paucimobilis, S. paucimobilis
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