Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
OAH46413.1Xylose ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (523 aa)    
Predicted Functional Partners:
OAH41343.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.763
OAH46826.1
G-D-S-L family lipolytic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.759
OAH47185.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.708
OAH40855.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.708
OAH35237.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.692
OAH46412.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.658
OAH46411.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
   
 
 0.594
OAH46432.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.589
OAH42649.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.584
OAH42667.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.552
Your Current Organism:
Sphingobium yanoikuyae
NCBI taxonomy Id: 13690
Other names: ATCC 51230, Beijerinckia sp. B1, CCUG 28380, CCUG 31205, CIP 106726, DSM 7462, GIFU 9882, GIFU:9882, IFO 15102, JCM 7371, LMG 11252, LMG:11252, NBRC 15102, S. yanoikuyae, Sphingobium sp. TJ, Sphingomonas yanoikuyae
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