Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OAH46434.1GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)    
Predicted Functional Partners:
OAH46399.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.923
OAH46432.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.809
OAH46433.1
GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.809
OAH46431.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.
     
 0.708
OAH46430.1
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.694
OAH46980.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.654
OAH46979.1
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the hyi family.
  
     0.604
OAH46983.1
GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.574
OAH41831.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.530
OAH46825.1
Pectin acetylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.527
Your Current Organism:
Sphingobium yanoikuyae
NCBI taxonomy Id: 13690
Other names: ATCC 51230, Beijerinckia sp. B1, CCUG 28380, CCUG 31205, CIP 106726, DSM 7462, GIFU 9882, GIFU:9882, IFO 15102, JCM 7371, LMG 11252, LMG:11252, NBRC 15102, S. yanoikuyae, Sphingobium sp. TJ, Sphingomonas yanoikuyae
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