STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAH35306.1Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)    
Predicted Functional Partners:
OAH46466.1
Methylamine dehydrogenase (amicyanin) light chain; Methylamine dehydrogenase carries out the oxidation of methylamine. Electrons are passed from methylamine dehydrogenase to amicyanin; Belongs to the aromatic amine dehydrogenase light chain family.
   
   0.845
OAH46469.1
Methylamine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.833
OAH45096.1
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.623
OAH45752.1
NADH-quinone oxidoreductase chain 13; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.575
OAH35307.1
Rhodanese; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.553
OAH45401.1
Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.519
OAH35308.1
Quinoprotein dehydrogenase-associated SoxYZ-like carrier; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.425
OAH45355.1
Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.418
OAH35309.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.404
OAH46463.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.403
Your Current Organism:
Sphingobium yanoikuyae
NCBI taxonomy Id: 13690
Other names: ATCC 51230, Beijerinckia sp. B1, CCUG 28380, CCUG 31205, CIP 106726, DSM 7462, GIFU 9882, GIFU:9882, IFO 15102, JCM 7371, LMG 11252, LMG:11252, NBRC 15102, S. yanoikuyae, Sphingobium sp. TJ, Sphingomonas yanoikuyae
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