Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OAH45941.1GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)    
Predicted Functional Partners:
OAH46412.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.823
OAH44222.1
Endo-1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.705
OAH46839.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.699
OAH45100.1
Tat pathway signal sequence domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.689
OAH42948.1
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.627
OAH45698.1
Alpha-glucuronidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 67 family.
 
    0.601
OAH46842.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 35 family.
  
    0.596
OAH33263.1
Feruloyl esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.571
OAH45706.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
OAH46436.1
Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.543
Your Current Organism:
Sphingobium yanoikuyae
NCBI taxonomy Id: 13690
Other names: ATCC 51230, Beijerinckia sp. B1, CCUG 28380, CCUG 31205, CIP 106726, DSM 7462, GIFU 9882, GIFU:9882, IFO 15102, JCM 7371, LMG 11252, LMG:11252, NBRC 15102, S. yanoikuyae, Sphingobium sp. TJ, Sphingomonas yanoikuyae
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