Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OAH41345.1 | OAH43930.1 | AX777_11720 | AX777_12575 | Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.409 |
| OAH41345.1 | OAH45823.1 | AX777_11720 | AX777_04080 | Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | 0.418 |
| OAH43930.1 | OAH41345.1 | AX777_12575 | AX777_11720 | Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology. | Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.409 |
| OAH43930.1 | OAH45823.1 | AX777_12575 | AX777_04080 | Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | 0.444 |
| OAH45822.1 | OAH45823.1 | AX777_04070 | AX777_04080 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | 0.405 |
| OAH45822.1 | OAH45824.1 | AX777_04070 | AX777_04085 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.405 |
| OAH45822.1 | OAH45825.1 | AX777_04070 | AX777_04090 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
| OAH45822.1 | OAH45950.1 | AX777_04070 | AX777_04075 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.552 |
| OAH45823.1 | OAH41345.1 | AX777_04080 | AX777_11720 | RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.418 |
| OAH45823.1 | OAH43930.1 | AX777_04080 | AX777_12575 | RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.444 |
| OAH45823.1 | OAH45822.1 | AX777_04080 | AX777_04070 | RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.405 |
| OAH45823.1 | OAH45824.1 | AX777_04080 | AX777_04085 | RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.882 |
| OAH45823.1 | OAH45825.1 | AX777_04080 | AX777_04090 | RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.783 |
| OAH45823.1 | OAH45950.1 | AX777_04080 | AX777_04075 | RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.563 |
| OAH45824.1 | OAH45822.1 | AX777_04085 | AX777_04070 | Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.405 |
| OAH45824.1 | OAH45823.1 | AX777_04085 | AX777_04080 | Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | 0.882 |
| OAH45824.1 | OAH45825.1 | AX777_04085 | AX777_04090 | Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.837 |
| OAH45824.1 | OAH45950.1 | AX777_04085 | AX777_04075 | Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.563 |
| OAH45825.1 | OAH45822.1 | AX777_04090 | AX777_04070 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
| OAH45825.1 | OAH45823.1 | AX777_04090 | AX777_04080 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | 0.783 |
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