STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAH45246.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)    
Predicted Functional Partners:
OAH45245.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.996
OAH45244.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.947
OAH45243.1
Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
     0.908
OAH43244.1
NAD+ synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.830
OAH45337.1
Nitric oxide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.624
OAH46370.1
PKHD-type hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.608
OAH39240.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.587
OAH42003.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.550
OAH41558.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.508
OAH40930.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.501
Your Current Organism:
Sphingobium yanoikuyae
NCBI taxonomy Id: 13690
Other names: ATCC 51230, Beijerinckia sp. B1, CCUG 28380, CCUG 31205, CIP 106726, DSM 7462, GIFU 9882, GIFU:9882, IFO 15102, JCM 7371, LMG 11252, LMG:11252, NBRC 15102, S. yanoikuyae, Sphingobium sp. TJ, Sphingomonas yanoikuyae
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