STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAH42990.1Formimidoylglutamate deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)    
Predicted Functional Partners:
HutC
Histidine utilization repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.979
OAH42987.1
N-formylglutamate deformylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.971
hutI
Imidazolonepropionase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.970
hutH
Catalyzes the degradation of histidine to urocanate and ammmonia; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.954
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.921
OAH35370.1
N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.746
OAH42643.1
N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.561
hutC
Histidine utilization repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.557
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.520
OAH45854.1
Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.
   
 
 0.504
Your Current Organism:
Sphingobium yanoikuyae
NCBI taxonomy Id: 13690
Other names: ATCC 51230, Beijerinckia sp. B1, CCUG 28380, CCUG 31205, CIP 106726, DSM 7462, GIFU 9882, GIFU:9882, IFO 15102, JCM 7371, LMG 11252, LMG:11252, NBRC 15102, S. yanoikuyae, Sphingobium sp. TJ, Sphingomonas yanoikuyae
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.