STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379125_00376Unannotated protein. (746 aa)    
Predicted Functional Partners:
GCA_000379125_00839
Unannotated protein.
 
 
 0.945
GCA_000379125_02118
Unannotated protein.
 
 
0.928
GCA_000379125_00147
Unannotated protein.
  
  
 
0.876
GCA_000379125_01211
Unannotated protein.
   
 
 0.861
GCA_000379125_00844
Unannotated protein.
  
 
 
 0.762
GCA_000379125_03106
Unannotated protein.
  
   
 0.706
GCA_000379125_01280
Unannotated protein.
  
   
 0.675
GCA_000379125_03377
Unannotated protein.
  
     0.660
GCA_000379125_02909
Unannotated protein.
 
     0.640
GCA_000379125_00841
Unannotated protein.
  
   
 0.637
Your Current Organism:
Methylosinus sp. LW4
NCBI taxonomy Id: 136993
Other names: M. sp. LW4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.