STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379125_00423Unannotated protein. (386 aa)    
Predicted Functional Partners:
GCA_000379125_01396
Unannotated protein.
  
 0.966
GCA_000379125_00421
Unannotated protein.
 
     0.953
GCA_000379125_00422
Unannotated protein.
 
  
 0.943
GCA_000379125_00420
Unannotated protein.
 
    0.940
GCA_000379125_00960
Unannotated protein.
  
 
  0.879
GCA_000379125_02740
Unannotated protein.
  
 
  0.874
GCA_000379125_00419
Unannotated protein.
 
 
   0.869
GCA_000379125_03110
Unannotated protein.
  
 
  0.862
GCA_000379125_00268
Unannotated protein.
  
 
  0.851
GCA_000379125_02043
Unannotated protein.
  
 
  0.848
Your Current Organism:
Methylosinus sp. LW4
NCBI taxonomy Id: 136993
Other names: M. sp. LW4
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.