STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379125_01028Unannotated protein. (490 aa)    
Predicted Functional Partners:
GCA_000379125_01396
Unannotated protein.
  
 0.966
GCA_000379125_02740
Unannotated protein.
   
 
  0.832
GCA_000379125_03851
Unannotated protein.
  
 0.809
GCA_000379125_00166
Unannotated protein.
   
  0.786
GCA_000379125_00706
Unannotated protein.
   
  0.786
GCA_000379125_01674
Unannotated protein.
   
  0.786
GCA_000379125_03616
Unannotated protein.
   
  0.786
GCA_000379125_00910
Unannotated protein.
  
  
  0.784
GCA_000379125_01539
Unannotated protein.
  
  
  0.784
GCA_000379125_00324
Unannotated protein.
    
 
 0.780
Your Current Organism:
Methylosinus sp. LW4
NCBI taxonomy Id: 136993
Other names: M. sp. LW4
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.