STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379125_01325Unannotated protein. (1242 aa)    
Predicted Functional Partners:
GCA_000379125_04391
Unannotated protein.
  
     0.675
GCA_000379125_01895
Unannotated protein.
 
 
 0.669
GCA_000379125_03529
Unannotated protein.
 
 
 0.661
GCA_000379125_00210
Unannotated protein.
  
 
  0.637
GCA_000379125_00506
Unannotated protein.
  
     0.632
GCA_000379125_04041
Unannotated protein.
 
 0.581
GCA_000379125_01324
Unannotated protein.
       0.570
GCA_000379125_01487
Unannotated protein.
  
     0.515
GCA_000379125_01069
Unannotated protein.
  
     0.504
GCA_000379125_03789
Unannotated protein.
   
 0.480
Your Current Organism:
Methylosinus sp. LW4
NCBI taxonomy Id: 136993
Other names: M. sp. LW4
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.