STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379125_01537Unannotated protein. (173 aa)    
Predicted Functional Partners:
GCA_000379125_01489
Unannotated protein.
   
 
 0.956
GCA_000379125_00745
Unannotated protein.
    
  0.771
GCA_000379125_01275
Unannotated protein.
    
  0.761
GCA_000379125_00778
Unannotated protein.
  
  
 0.752
GCA_000379125_01209
Unannotated protein.
   
  0.729
GCA_000379125_02879
Unannotated protein.
   
  0.729
GCA_000379125_03126
Unannotated protein.
   
    0.729
GCA_000379125_01772
Unannotated protein.
     
 0.711
GCA_000379125_02044
Unannotated protein.
    
  0.711
GCA_000379125_02014
Unannotated protein.
    
  0.700
Your Current Organism:
Methylosinus sp. LW4
NCBI taxonomy Id: 136993
Other names: M. sp. LW4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.