STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379125_03049Unannotated protein. (604 aa)    
Predicted Functional Partners:
GCA_000379125_01296
Unannotated protein.
   
   0.954
GCA_000379125_03639
Unannotated protein.
    
  0.794
GCA_000379125_02617
Unannotated protein.
    
  0.731
GCA_000379125_03733
Unannotated protein.
  
 0.674
GCA_000379125_00901
Unannotated protein.
  
 
  0.594
GCA_000379125_01422
Unannotated protein.
    
  0.587
GCA_000379125_03050
Unannotated protein.
 
     0.570
GCA_000379125_02540
Unannotated protein.
    
  0.567
GCA_000379125_03034
Unannotated protein.
     
 0.541
GCA_000379125_03789
Unannotated protein.
  
 
 0.530
Your Current Organism:
Methylosinus sp. LW4
NCBI taxonomy Id: 136993
Other names: M. sp. LW4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.