STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2GYZ34-hydroxyphenylpyruvate dioxygenase. (402 aa)    
Predicted Functional Partners:
A0A1X2HTS0
Homogentisate 1,2-dioxygenase.
  
 0.992
A0A1X2HG85
Putative tyrosine aminotransferase.
   
 
 0.926
A0A1X2HHI6
Aspartate aminotransferase.
  
 
 0.904
A0A1X2H9Z6
Propionyl-CoA carboxylase beta chain.
  
 
 0.894
A0A1X2HMU2
Carboxyl transferase.
  
 
 0.894
A0A1X2HRM0
Carboxyl transferase.
  
 
 0.894
A0A1X2HWB3
Methylcrotonoyl-CoA carboxylase beta chain.
  
 
 0.894
A0A1X2HFE3
Tryptophan synthase.
   
 
 0.877
A0A1X2HPD7
Uncharacterized protein.
  
 
 0.870
A0A1X2HR37
Aspartate aminotransferase.
  
 
 0.870
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.