STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2GYZ8Uncharacterized protein. (314 aa)    
Predicted Functional Partners:
A0A1X2HPN1
Ubiquitin fusion degradation protein UFD1-domain-containing protein.
   
 
 0.978
A0A1X2H777
WD40-repeat-containing domain protein.
    
 
 0.975
A0A1X2H773
NPL4 family-domain-containing protein.
    
 
 0.973
A0A1X2HUZ4
Uncharacterized protein.
   
 
 0.973
A0A1X2HPU0
Ubiquitin elongating factor core-domain-containing protein.
    
 
 0.969
A0A1X2HLU7
Transitional endoplasmic reticulum ATPase.
   
 0.959
A0A1X2HRN2
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.
   
 0.959
A0A1X2HFL2
Ribosomal protein S27a-domain-containing protein.
    
 
 0.941
A0A1X2HDH5
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.933
A0A1X2HLF2
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.
   
 0.933
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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