STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H0V4Uncharacterized protein. (217 aa)    
Predicted Functional Partners:
A0A1X2H8Q5
Uncharacterized protein.
    
  0.693
SUS1
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]
    
 0.633
A0A1X2H5E4
SCA7, zinc-binding domain-domain-containing protein.
    
 0.607
A0A1X2HG22
Dbl homology domain-containing protein.
    
 0.584
A0A1X2HHT0
Uncharacterized protein.
    
 0.584
A0A1X2H0U2
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.582
A0A1X2HLF8
Transcription initiation factor TFIID subunit A-domain-containing protein.
    
 0.555
A0A1X2H0I3
Uridine kinase family-domain-containing protein.
    
 0.551
A0A1X2H7E2
Uracil phosphoribosyltransferase-domain-containing protein.
    
 0.551
A0A1X2HA19
Uracil phosphoribosyltransferase-domain-containing protein.
    
 0.551
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.