STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H118Uncharacterized protein. (114 aa)    
Predicted Functional Partners:
A0A1X2H7I4
Cytidine deaminase-like protein.
   
 0.937
A0A1X2HRG3
Cytidine deaminase-like protein.
  
 0.848
A0A1X2H1P2
Uncharacterized protein.
    
 0.780
A0A1X2H9I9
Cytidine deaminase-like protein.
    
 0.780
A0A1X2HVG3
Cmp/dcmp deaminase zinc-binding protein.
    
 0.780
A0A1X2HPX9
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
  
 
 0.779
BCR43DRAFT_491
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
  0.715
A0A1X2HS00
Thymidylate synthase.
  
 
 0.690
A0A1X2HQB4
Metallo-dependent phosphatase-like protein.
    
 0.677
A0A1X2HF19
Inosine/uridine-preferring nucleoside hydrolase domain-containing protein.
    
 0.652
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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